Prepare 'RAVE' single-subject data

Usage

prepare_subject_bare0(
  subject,
  electrodes,
  reference_name,
  ...,
  quiet = TRUE,
  repository_id = NULL
)

prepare_subject_bare(
  subject,
  electrodes,
  reference_name,
  ...,
  repository_id = NULL
)

prepare_subject_with_epoch(
  subject,
  electrodes,
  reference_name,
  epoch_name,
  time_windows,
  stitch_events = NULL,
  env = parent.frame(),
  ...
)

prepare_subject_with_blocks(
  subject,
  electrodes,
  reference_name,
  blocks,
  raw = FALSE,
  signal_type = "LFP",
  time_frequency = (!raw && signal_type == "LFP"),
  quiet = raw,
  env = parent.frame(),
  repository_id = NULL,
  ...
)

prepare_subject_phase(
  subject,
  electrodes,
  reference_name,
  epoch_name,
  time_windows,
  stitch_events = NULL,
  signal_type = c("LFP"),
  env = parent.frame(),
  verbose = TRUE,
  ...
)

prepare_subject_power(
  subject,
  electrodes,
  reference_name,
  epoch_name,
  time_windows,
  stitch_events = NULL,
  signal_type = c("LFP"),
  env = parent.frame(),
  verbose = TRUE,
  ...
)

prepare_subject_wavelet(
  subject,
  electrodes,
  reference_name,
  epoch_name,
  time_windows,
  stitch_events = NULL,
  signal_type = c("LFP"),
  env = parent.frame(),
  verbose = TRUE,
  ...
)

prepare_subject_raw_voltage_with_epoch(
  subject,
  electrodes,
  epoch_name,
  time_windows,
  stitch_events = NULL,
  ...,
  quiet = TRUE,
  repository_id = NULL
)

prepare_subject_voltage_with_epoch(
  subject,
  electrodes,
  epoch_name,
  time_windows,
  reference_name,
  stitch_events = NULL,
  ...,
  quiet = TRUE,
  repository_id = NULL
)

Arguments

subject: character of project and subject, such as "demo/YAB", or RAVESubject instance
electrodes: integer vector of electrodes, or a character that can be parsed by parse_svec
reference_name: reference name to be loaded
...: ignored
quiet: whether to quietly load the data
repository_id: used internally
epoch_name: epoch name to be loaded, or a RAVEEpoch instance
time_windows: a list of time windows that are relative to epoch onset time; need to pass the validation validate_time_window
stitch_events: events to stitch, default is NULL, meaning when loading data, the time is relative to the trial onset (column "Time" in the epoch file); set to a character of length 2, representing the events if time is not relative to trial onset. Please remove the prefix. For example, for a column named "Event_name", the event name is "name".
env: environment to evaluate
blocks: one or more session blocks to load
raw: whether to load from original (before processing) data; if true, then time-frequency data will not be loaded.
signal_type: electrode signal type (length of one) to be considered; default is 'LFP'. This option rarely needs to change unless you really want to check the power data from other types. For other signal types, check SIGNAL_TYPES
time_frequency: whether to load time-frequency data when preparing block data
verbose: whether to show progress

Value

A fastmap2 (basically a list) of objects. Depending on the functions called, the following items may exist in the list:

subject: A RAVESubject instance
epoch_name: Same as input epoch_name
epoch: A RAVEEpoch instance
reference_name: Same as input reference_name
reference_table: A data frame of reference
electrode_table: A data frame of electrode information
frequency: A vector of frequencies
time_points: A vector of time-points
power_list: A list of power data of the electrodes
power_dimnames: A list of trial indices, frequencies, time points, and electrodes that are loaded